HomozgosityMapper pedigree Login

Genome-wide homozygosity in Tutorial_SNP - hi2

55712 sites Max homozygosity score: 1200

Click on a chromosome to zoom in.

Broad – use this when you expect some genetic heterogeneity

scorechrfrom (bp)to (bp)length (bp)build 37
1200841807750492892577481508RegionGenotypes
1200729944869365476896602821RegionGenotypes
1089771726874772174745490601RegionGenotypes
9771936911000383173881406389RegionGenotypes
8877713589147144946990556RegionGenotypes
863174506334945755810692462RegionGenotypes
809296195730999961653800436RegionGenotypes
75411471483041500936282945325RegionGenotypes
7331466346942682574851910544RegionGenotypes
7232032482632336402421157611RegionGenotypes

Narrow – use this when all patients are from the same family

scorechrfrom (bp)to (bp)length (bp)build 37
1200841807750492892577481508RegionGenotypes
1200729944869365476896602821RegionGenotypes
1089771726874772174745490601RegionGenotypes
9771936911000383173881406389RegionGenotypes
8877713589147144946990556RegionGenotypes
863174506334945755810692462RegionGenotypes
809296195730999961653800436RegionGenotypes
75411471483041500936282945325RegionGenotypes
7331466346942682574851910544RegionGenotypes
7232032482632336402421157611RegionGenotypes

Options and Exports

Change threshold
Call GeneDistiller build 37
/
Create a BED file build 37
/
Homozyosity scores
Retrieve

Analysis settings

project_nameTutorial_SNP (Change name)
analysis_namehi2 (Change name)
analysis_descriptionhi1
max_block_length6
max_score1200
owner_loginmelvo98
lower_limit0
date2023-10-18 00:00:00
casesNA06993,NA07019
controlsNA07034,NA07056