HomozgosityMapper pedigree Login

Homozygosity on chromosome 7 in Tutorial_SNP - Tutorial_SNP_Analysis

12 sites Max homozygosity score: 3000
zoom in
genotypes
29483759 bp
Chromosome 7
bp

You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot.

Broad – use this when you expect some genetic heterogeneity

scorechrfrom (bp)to (bp)length (bp)build 37
184472948375929648108164350RegionGenotypes

Narrow – use this when all patients are from the same family

scorechrfrom (bp)to (bp)length (bp)build 37
184472948375929648108164350RegionGenotypes
180072964760829648108501RegionGenotypes

Options and Exports

Change threshold
Call GeneDistiller build 37
/
Create a BED file build 37
/
Homozyosity scores
Retrieve

Analysis settings

project_nameTutorial_SNP (Change name)
analysis_nameTutorial_SNP_Analysis (Change name)
max_block_length6
max_score3000
owner_loginmelvo98
lower_limit0
date2021-01-06 00:00:00
casesNA06993,NA07019,NA07034,NA07056,NA07357
controlsNA10835,NA10846,NA10854