Click on a chromosome to zoom in. | help tutorial |
score | chr | from (bp) | to (bp) | from SNP | to SNP | build 37 | |
broad - use this when you expect some genetic heterogeneity | |||||||
160 | 2 | 69483780 | 70579965 | #2075 | #139247 | region | genotypes |
160 | 2 | 76960814 | 78226552 | #139559 | #139621 | region | genotypes |
160 | 3 | 7532293 | 12100284 | #140400 | #140659 | region | genotypes |
160 | 3 | 12501694 | 16066704 | #140687 | #64256 | region | genotypes |
160 | 3 | 16734435 | 17915305 | #140936 | #141007 | region | genotypes |
160 | 3 | 19942977 | 20974420 | #141135 | #28736 | region | genotypes |
160 | 4 | 21269301 | 23280209 | #146091 | #146202 | region | genotypes |
160 | 4 | 73588836 | 75458688 | #30784 | #30814 | region | genotypes |
160 | 5 | 3037864 | 5556488 | #69296 | #150097 | region | genotypes |
160 | 5 | 6438626 | 7502526 | #150146 | #150205 | region | genotypes |
160 | 5 | 21023580 | 22511417 | #150897 | #31369 | region | genotypes |
160 | 5 | 58351443 | 67952631 | #152795 | #153242 | region | genotypes |
160 | 6 | 26545462 | 28442168 | #155517 | #155599 | region | genotypes |
160 | 6 | 31058982 | 32701813 | #155725 | #155797 | region | genotypes |
160 | 6 | 34227981 | 46159294 | #155879 | #156467 | region | genotypes |
160 | 6 | 46172183 | 48039192 | #5981 | #156575 | region | genotypes |
160 | 6 | 64335297 | 66017823 | #157536 | #157621 | region | genotypes |
160 | 7 | 25656416 | 26856750 | #34047 | #159723 | region | genotypes |
160 | 7 | 76892126 | 77167501 | #7278 | #77299 | region | genotypes |
160 | 8 | 3031325 | 4821131 | #162804 | #34907 | region | genotypes |
160 | 8 | 9282307 | 10200293 | #163131 | #163187 | region | genotypes |
160 | 8 | 10718744 | 11096721 | #163217 | #163237 | region | genotypes |
160 | 8 | 12291760 | 14075004 | #77876 | #35002 | region | genotypes |
160 | 8 | 25209593 | 26283832 | #164040 | #164106 | region | genotypes |
160 | 8 | 35167502 | 37693901 | #35173 | #164717 | region | genotypes |
160 | 8 | 38976290 | 40887918 | #164792 | #164888 | region | genotypes |
160 | 9 | 11670349 | 20430110 | #166934 | #167359 | region | genotypes |
160 | 10 | 14757231 | 15445695 | #169875 | #36948 | region | genotypes |
160 | 10 | 37953471 | 39202650 | #171010 | #171081 | region | genotypes |
160 | 10 | 49903482 | 59045568 | #171665 | #172170 | region | genotypes |
160 | 10 | 61642076 | 62488946 | #172312 | #37613 | region | genotypes |
160 | 12 | 23510103 | 27384349 | #177525 | #177750 | region | genotypes |
160 | 12 | 36415143 | 38480905 | #178270 | #178384 | region | genotypes |
160 | 12 | 43567306 | 43610379 | #178681 | #178685 | region | genotypes |
160 | 12 | 52843170 | 54563889 | #179204 | #10987 | region | genotypes |
160 | 12 | 55431763 | 56524094 | #179367 | #179437 | region | genotypes |
160 | 12 | 57666887 | 65022650 | #179513 | #88631 | region | genotypes |
160 | 13 | 3848371 | 18093370 | #180543 | #181426 | region | genotypes |
160 | 14 | 5752740 | 7169392 | #184105 | #12085 | region | genotypes |
160 | 14 | 34235559 | 41885695 | #185713 | #186128 | region | genotypes |
160 | 15 | 27761794 | 28811167 | #188605 | #188670 | region | genotypes |
160 | 17 | 33594537 | 34535470 | #195419 | #195465 | region | genotypes |
160 | 18 | 5430590 | 7824592 | #14991 | #197338 | region | genotypes |
160 | 18 | 40584271 | 41687622 | #199215 | #199273 | region | genotypes |
160 | 19 | 38583854 | 39562541 | #202156 | #202211 | region | genotypes |
160 | 19 | 39620759 | 41986929 | #101511 | #202339 | region | genotypes |
160 | 20 | 3006789 | 9743427 | #203196 | #203493 | region | genotypes |
160 | 22 | 3041181 | 6163861 | #208788 | #46893 | region | genotypes |
160 | 23 | 21377710 | 22712107 | #213208 | #213277 | region | genotypes |
160 | 24 | 32810216 | 33324606 | #216484 | #19373 | region | genotypes |
160 | 25 | 3055674 | 4903222 | #217355 | #217435 | region | genotypes |
160 | 25 | 5529024 | 7018885 | #217474 | #217572 | region | genotypes |
160 | 27 | 45317050 | 47092760 | #51700 | #51713 | region | genotypes |
160 | 29 | 17436402 | 22682085 | #227251 | #227568 | region | genotypes |
160 | 29 | 23065088 | 26778862 | #227591 | #227810 | region | genotypes |
160 | 30 | 4225908 | 5544192 | #228830 | #228904 | region | genotypes |
160 | 31 | 3009467 | 4086164 | #230848 | #22761 | region | genotypes |
160 | 31 | 4394865 | 5885665 | #230936 | #22777 | region | genotypes |
160 | 31 | 10108838 | 19687944 | #231297 | #22929 | region | genotypes |
160 | 37 | 28921205 | 30748208 | #56970 | #25659 | region | genotypes |
160 | 38 | 20861014 | 22517524 | #25933 | #57430 | region | genotypes |
158 | 6 | 5870138 | 6832400 | #32567 | #154567 | region | genotypes |
157 | 7 | 20773728 | 21774828 | #159389 | #159450 | region | genotypes |
157 | 12 | 27472774 | 28703308 | #177755 | #177820 | region | genotypes |
156 | 10 | 19554997 | 20039109 | #170111 | #170135 | region | genotypes |
155 | 8 | 63389755 | 64323437 | #165959 | #35564 | region | genotypes |
154 | 19 | 3011775 | 4340151 | #200138 | #200208 | region | genotypes |
152 | 7 | 58655945 | 59769003 | #161393 | #161457 | region | genotypes |
152 | 7 | 59847098 | 60666640 | #161462 | #161509 | region | genotypes |
150 | 5 | 16377676 | 16850124 | #150657 | #150684 | region | genotypes |
150 | 37 | 3019949 | 4045838 | #242455 | #127554 | region | genotypes |
148 | 32 | 4889065 | 5748549 | #233125 | #54173 | region | genotypes |
147 | 5 | 18600102 | 19398790 | #150772 | #150817 | region | genotypes |
147 | 6 | 29323840 | 30216395 | #5799 | #155681 | region | genotypes |
147 | 18 | 9120598 | 9996030 | #197418 | #43857 | region | genotypes |
145 | 2 | 39459504 | 40503744 | #137663 | #137704 | region | genotypes |
145 | 6 | 76913741 | 77610032 | #158271 | #33622 | region | genotypes |
144 | 3 | 93890772 | 94246515 | #29911 | #145035 | region | genotypes |
144 | 14 | 11712614 | 12527316 | #40518 | #184441 | region | genotypes |
144 | 25 | 20691029 | 21584665 | #49679 | #49682 | region | genotypes |
143 | 1 | 53771441 | 54507021 | #132320 | #132364 | region | genotypes |
143 | 10 | 10944541 | 11998853 | #169690 | #169734 | region | genotypes |
142 | 8 | 32670336 | 33515975 | #7679 | #35151 | region | genotypes |
142 | 12 | 50036090 | 51212577 | #179058 | #179118 | region | genotypes |
142 | 14 | 3820016 | 5344456 | #184030 | #184083 | region | genotypes |
141 | 10 | 60415501 | 61341437 | #172245 | #37608 | region | genotypes |
140 | 9 | 37453317 | 37533691 | #168156 | #168163 | region | genotypes |
139 | 2 | 30899353 | 31687175 | #27778 | #137308 | region | genotypes |
139 | 11 | 35453715 | 35911874 | #174287 | #85918 | region | genotypes |
139 | 21 | 20219726 | 20792593 | #46266 | #207091 | region | genotypes |
138 | 7 | 77740012 | 78443644 | #7291 | #162515 | region | genotypes |
137 | 1 | 101408174 | 102397881 | #134787 | #27252 | region | genotypes |
137 | 9 | 32404436 | 33136942 | #167903 | #167944 | region | genotypes |
136 | 25 | 39210185 | 39877701 | #219308 | #20059 | region | genotypes |
135 | 1 | 98973511 | 99327208 | #60016 | #60025 | region | genotypes |
135 | 7 | 48347771 | 49071257 | #160843 | #34337 | region | genotypes |
135 | 26 | 28511539 | 30198596 | #221310 | #221361 | region | genotypes |
134 | 1 | 37571909 | 38234552 | #131436 | #131469 | region | genotypes |
134 | 1 | 55270317 | 56114246 | #132400 | #132444 | region | genotypes |
134 | 6 | 28548286 | 29236525 | #155604 | #5797 | region | genotypes |
133 | 7 | 39418614 | 40226810 | #160398 | #160446 | region | genotypes |
132 | 4 | 5108949 | 5785078 | #145180 | #145225 | region | genotypes |
132 | 14 | 9972614 | 10738431 | #12105 | #184345 | region | genotypes |
131 | 2 | 76088196 | 76847874 | #28353 | #139554 | region | genotypes |
131 | 23 | 28119858 | 28849590 | #18560 | #213634 | region | genotypes |
130 | 7 | 31008974 | 31759110 | #159931 | #159973 | region | genotypes |
130 | 19 | 6042268 | 6931631 | #200291 | #15546 | region | genotypes |
130 | 26 | 17557406 | 18020852 | #220819 | #220845 | region | genotypes |
129 | 2 | 41296660 | 41878501 | #1763 | #1771 | region | genotypes |
129 | 2 | 66298658 | 66796723 | #28187 | #28212 | region | genotypes |
129 | 27 | 47361404 | 47940856 | #224377 | #21240 | region | genotypes |
128 | 25 | 7813246 | 8557417 | #49469 | #217651 | region | genotypes |
128 | 27 | 44570054 | 45103299 | #224237 | #51690 | region | genotypes |
128 | 30 | 7740401 | 8642075 | #229035 | #229081 | region | genotypes |
narrow - use this when all patients are in the same family | |||||||
160 | 2 | 69483780 | 70579965 | #2075 | #139247 | region | genotypes |
160 | 2 | 76960814 | 78226552 | #139559 | #139621 | region | genotypes |
160 | 3 | 7532293 | 12100284 | #140400 | #140659 | region | genotypes |
160 | 3 | 12501694 | 16066704 | #140687 | #64256 | region | genotypes |
160 | 3 | 16734435 | 17915305 | #140936 | #141007 | region | genotypes |
160 | 3 | 19942977 | 20974420 | #141135 | #28736 | region | genotypes |
160 | 4 | 21269301 | 23280209 | #146091 | #146202 | region | genotypes |
160 | 4 | 73588836 | 75458688 | #30784 | #30814 | region | genotypes |
160 | 5 | 3037864 | 5556488 | #69296 | #150097 | region | genotypes |
160 | 5 | 6438626 | 7502526 | #150146 | #150205 | region | genotypes |
160 | 5 | 21023580 | 22511417 | #150897 | #31369 | region | genotypes |
160 | 5 | 58351443 | 67952631 | #152795 | #153242 | region | genotypes |
160 | 6 | 26545462 | 28442168 | #155517 | #155599 | region | genotypes |
160 | 6 | 31058982 | 32701813 | #155725 | #155797 | region | genotypes |
160 | 6 | 34227981 | 46159294 | #155879 | #156467 | region | genotypes |
160 | 6 | 46172183 | 48039192 | #5981 | #156575 | region | genotypes |
160 | 6 | 64335297 | 66017823 | #157536 | #157621 | region | genotypes |
160 | 7 | 25656416 | 26856750 | #34047 | #159723 | region | genotypes |
160 | 7 | 76892126 | 77167501 | #7278 | #77299 | region | genotypes |
160 | 8 | 3031325 | 4821131 | #162804 | #34907 | region | genotypes |
160 | 8 | 9282307 | 10200293 | #163131 | #163187 | region | genotypes |
160 | 8 | 10718744 | 11096721 | #163217 | #163237 | region | genotypes |
160 | 8 | 12291760 | 14075004 | #77876 | #35002 | region | genotypes |
160 | 8 | 25209593 | 26283832 | #164040 | #164106 | region | genotypes |
160 | 8 | 35167502 | 37693901 | #35173 | #164717 | region | genotypes |
160 | 8 | 38976290 | 40887918 | #164792 | #164888 | region | genotypes |
160 | 9 | 11670349 | 20430110 | #166934 | #167359 | region | genotypes |
160 | 10 | 14757231 | 15445695 | #169875 | #36948 | region | genotypes |
160 | 10 | 37953471 | 39202650 | #171010 | #171081 | region | genotypes |
160 | 10 | 49903482 | 59045568 | #171665 | #172170 | region | genotypes |
160 | 10 | 61642076 | 62488946 | #172312 | #37613 | region | genotypes |
160 | 12 | 23510103 | 27384349 | #177525 | #177750 | region | genotypes |
160 | 12 | 36415143 | 38480905 | #178270 | #178384 | region | genotypes |
160 | 12 | 43567306 | 43610379 | #178681 | #178685 | region | genotypes |
160 | 12 | 52843170 | 54563889 | #179204 | #10987 | region | genotypes |
160 | 12 | 55431763 | 56524094 | #179367 | #179437 | region | genotypes |
160 | 12 | 57666887 | 65022650 | #179513 | #88631 | region | genotypes |
160 | 13 | 3848371 | 18093370 | #180543 | #181426 | region | genotypes |
160 | 14 | 5752740 | 7169392 | #184105 | #12085 | region | genotypes |
160 | 14 | 34235559 | 41885695 | #185713 | #186128 | region | genotypes |
160 | 15 | 27761794 | 28811167 | #188605 | #188670 | region | genotypes |
160 | 17 | 33594537 | 34535470 | #195419 | #195465 | region | genotypes |
160 | 18 | 5430590 | 7824592 | #14991 | #197338 | region | genotypes |
160 | 18 | 40584271 | 41687622 | #199215 | #199273 | region | genotypes |
160 | 19 | 38583854 | 39562541 | #202156 | #202211 | region | genotypes |
160 | 19 | 39620759 | 41986929 | #101511 | #202339 | region | genotypes |
160 | 20 | 3006789 | 9743427 | #203196 | #203493 | region | genotypes |
160 | 22 | 3041181 | 6163861 | #208788 | #46893 | region | genotypes |
160 | 23 | 21377710 | 22712107 | #213208 | #213277 | region | genotypes |
160 | 24 | 32810216 | 33324606 | #216484 | #19373 | region | genotypes |
160 | 25 | 3055674 | 4903222 | #217355 | #217435 | region | genotypes |
160 | 25 | 5529024 | 7018885 | #217474 | #217572 | region | genotypes |
160 | 27 | 45317050 | 47092760 | #51700 | #51713 | region | genotypes |
160 | 29 | 17436402 | 22682085 | #227251 | #227568 | region | genotypes |
160 | 29 | 23065088 | 26778862 | #227591 | #227810 | region | genotypes |
160 | 30 | 4225908 | 5544192 | #228830 | #228904 | region | genotypes |
160 | 31 | 3009467 | 4086164 | #230848 | #22761 | region | genotypes |
160 | 31 | 4394865 | 5885665 | #230936 | #22777 | region | genotypes |
160 | 31 | 10108838 | 19687944 | #231297 | #22929 | region | genotypes |
160 | 37 | 28921205 | 30748208 | #56970 | #25659 | region | genotypes |
160 | 38 | 20861014 | 22517524 | #25933 | #57430 | region | genotypes |
158 | 6 | 5870138 | 6832400 | #32567 | #154567 | region | genotypes |
157 | 7 | 20773728 | 21774828 | #159389 | #159450 | region | genotypes |
157 | 12 | 27472774 | 28703308 | #177755 | #177820 | region | genotypes |
156 | 10 | 19554997 | 20039109 | #170111 | #170135 | region | genotypes |
155 | 8 | 63389755 | 64323437 | #165959 | #35564 | region | genotypes |
154 | 19 | 3011775 | 4340151 | #200138 | #200208 | region | genotypes |
152 | 7 | 58655945 | 59769003 | #161393 | #161457 | region | genotypes |
152 | 7 | 59847098 | 60666640 | #161462 | #161509 | region | genotypes |
150 | 5 | 16377676 | 16850124 | #150657 | #150684 | region | genotypes |
150 | 37 | 3019949 | 4045838 | #242455 | #127554 | region | genotypes |
148 | 32 | 4889065 | 5748549 | #233125 | #54173 | region | genotypes |
147 | 5 | 18600102 | 19398790 | #150772 | #150817 | region | genotypes |
147 | 6 | 29323840 | 30216395 | #5799 | #155681 | region | genotypes |
147 | 18 | 9120598 | 9996030 | #197418 | #43857 | region | genotypes |
145 | 2 | 39459504 | 40503744 | #137663 | #137704 | region | genotypes |
145 | 6 | 76913741 | 77610032 | #158271 | #33622 | region | genotypes |
144 | 3 | 93890772 | 94246515 | #29911 | #145035 | region | genotypes |
144 | 14 | 11712614 | 12527316 | #40518 | #184441 | region | genotypes |
144 | 25 | 20691029 | 21584665 | #49679 | #49682 | region | genotypes |
143 | 1 | 53771441 | 54507021 | #132320 | #132364 | region | genotypes |
143 | 10 | 10944541 | 11998853 | #169690 | #169734 | region | genotypes |
142 | 8 | 32670336 | 33515975 | #7679 | #35151 | region | genotypes |
142 | 12 | 50036090 | 51212577 | #179058 | #179118 | region | genotypes |
142 | 14 | 3820016 | 5344456 | #184030 | #184083 | region | genotypes |
141 | 10 | 60415501 | 61341437 | #172245 | #37608 | region | genotypes |
140 | 9 | 37453317 | 37533691 | #168156 | #168163 | region | genotypes |
139 | 2 | 30899353 | 31687175 | #27778 | #137308 | region | genotypes |
139 | 11 | 35453715 | 35911874 | #174287 | #85918 | region | genotypes |
139 | 21 | 20219726 | 20792593 | #46266 | #207091 | region | genotypes |
138 | 7 | 77740012 | 78443644 | #7291 | #162515 | region | genotypes |
137 | 1 | 101408174 | 102397881 | #134787 | #27252 | region | genotypes |
137 | 9 | 32404436 | 33136942 | #167903 | #167944 | region | genotypes |
136 | 25 | 39210185 | 39877701 | #219308 | #20059 | region | genotypes |
135 | 1 | 98973511 | 99327208 | #60016 | #60025 | region | genotypes |
135 | 7 | 48347771 | 49071257 | #160843 | #34337 | region | genotypes |
135 | 26 | 28511539 | 30198596 | #221310 | #221361 | region | genotypes |
134 | 1 | 37571909 | 38234552 | #131436 | #131469 | region | genotypes |
134 | 1 | 55270317 | 56114246 | #132400 | #132444 | region | genotypes |
134 | 6 | 28548286 | 29236525 | #155604 | #5797 | region | genotypes |
133 | 7 | 39418614 | 40226810 | #160398 | #160446 | region | genotypes |
132 | 4 | 5108949 | 5785078 | #145180 | #145225 | region | genotypes |
132 | 14 | 9972614 | 10738431 | #12105 | #184345 | region | genotypes |
131 | 2 | 76088196 | 76847874 | #28353 | #139554 | region | genotypes |
131 | 23 | 28119858 | 28849590 | #18560 | #213634 | region | genotypes |
130 | 7 | 31008974 | 31759110 | #159931 | #159973 | region | genotypes |
130 | 19 | 6042268 | 6931631 | #200291 | #15546 | region | genotypes |
130 | 26 | 17557406 | 18020852 | #220819 | #220845 | region | genotypes |
129 | 2 | 41296660 | 41878501 | #1763 | #1771 | region | genotypes |
129 | 2 | 66298658 | 66796723 | #28187 | #28212 | region | genotypes |
129 | 27 | 47361404 | 47940856 | #224377 | #21240 | region | genotypes |
128 | 25 | 7813246 | 8557417 | #49469 | #217651 | region | genotypes |
128 | 27 | 44570054 | 45103299 | #224237 | #51690 | region | genotypes |
128 | 30 | 7740401 | 8642075 | #229035 | #229081 | region | genotypes |
analysis settings | ||
project_name | canine_100_ped_homo_ys | change name |
analysis_name | Canine_100_ped_homozy_ys_copy | change name |
analysis_description | Case control analysis canine 100 ped | |
max_block_length | 80 | |
max_score | 160 | |
allele_frequencies | controls | |
user_login | ahramd1 | |
homogeneity_required | homogeneity required | |
lower_limit | 0 | |
date | 2012-02-23 00:00:00 | |
exclusion_length | -1 | |
cases | 100-002,100-017 | |
controls | 100-001,100-013 |