Homozygosity on chromosome 27 in Canine_hom_map_27_3_12 - 325_ped_homo_mapping-2

max homozygosity score: 80
 146 markers
4210000 bp chromosome 27 9616767 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
802742100009616767#222026#222307regiongenotypes
narrow - use this when all patients are in the same family
802742100009616767#222026#222307regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
  
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameCanine_hom_map_27_3_12change name
analysis_name325_ped_homo_mapping-2change name
analysis_description325 ped homozygosity mapping
max_block_length80
max_score80
user_loginahramd
lower_limit0
date2012-03-30 00:00:00
cases325-001
controls325-002,325-003,325-004


retrieve homozyosity scores