Homozygosity on chromosome 31 in Canine_hom_map_27_3_12 - Canine_hom_map_27_3_12_100-2_ped_copy

max homozygosity score: 91
26 markers
3470611 bp chromosome 31 4086164 bp
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scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
913134706114086164#121273#22761regiongenotypes
narrow - use this when all patients are in the same family
913134706114086164#121273#22761regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameCanine_hom_map_27_3_12change name
analysis_nameCanine_hom_map_27_3_12_100-2_ped_copychange name
analysis_description100-2 pedigree homozygosity mapping
max_block_length80
max_score91
user_loginahramd
homogeneity_requiredhomogeneity required
lower_limit0
date2012-03-30 00:00:00
exclusion_length250
cases100-002,100-017,100-072
controls100-001,100-013


retrieve homozyosity scores