Homozygosity on chromosome 27 in Canine_hom_map_27_3_12 - Canine_hom_map_27_3_12_350-2_ped-2_copy

max homozygosity score: 400
53 markers
25312140 bp chromosome 27 26972909 bp
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scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
321272531214026972909#223210#223304regiongenotypes
narrow - use this when all patients are in the same family
321272531214025323455#223210#223211regiongenotypes
320272531214026972909#223210#223304regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameCanine_hom_map_27_3_12change name
analysis_nameCanine_hom_map_27_3_12_350-2_ped-2_copychange name
analysis_description350 ped-2 homozygosity mapping
max_block_length80
max_score400
user_loginahramd
lower_limit0
date2012-04-07 00:00:00
cases350-001,350-002,350-005,350-022,350-043
controls350-010,350-011,350-012,350-038


retrieve homozyosity scores