Homozygosity on chromosome 13 in affecteds_350_320 - affecteds_350_320

max homozygosity score: 880
1105 markers
3036181 bp chromosome 13 18171797 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
88013303618118171797#39521#181432regiongenotypes
narrow - use this when all patients are in the same family
8801330361815201827#39521#180627regiongenotypes
8651354229196383843#180638#180695regiongenotypes
834131521101715671311#181244#39624regiongenotypes
8331388286439236734#11303#180870regiongenotypes
829131769295718047801#181403#181422regiongenotypes
828131064457211079568#180962#180989regiongenotypes
8221375137877908654#180769#180795regiongenotypes
821131149640811777117#181017#181032regiongenotypes
820131567464815977923#89239#181289regiongenotypes
818131118861711466979#11331#11333regiongenotypes
8171364878486777361#180702#180717regiongenotypes
817131225164612509494#181062#181076regiongenotypes
8161368431787086495#180722#180739regiongenotypes
8151395690719809028#180896#180912regiongenotypes
814131345663913678709#181135#181147regiongenotypes
814131638768216573431#181320#181333regiongenotypes
812131623264016383882#11379#181319regiongenotypes
811131466214214827317#181212#181224regiongenotypes
81013999798010117059#180922#39570regiongenotypes
809131262872312758804#181085#181095regiongenotypes
8081385970988726417#11299#180842regiongenotypes
808131710786017206716#89261#181375regiongenotypes
807131047995410623213#180949#180960regiongenotypes
807131739035417499527#181385#181394regiongenotypes
806131599075616072110#181290#11377regiongenotypes
806131610403516212235#39629#181305regiongenotypes
8051353329315422919#11269#180638regiongenotypes
8051373314167401047#180757#180762regiongenotypes
8051398234649899740#180914#11315regiongenotypes
805131018449810250132#39575#180936regiongenotypes
805131036234910436318#180942#180946regiongenotypes
805131183468911920014#11337#181041regiongenotypes
805131199485412075858#181046#181050regiongenotypes
805131256203812628723#39596#181085regiongenotypes
805131335280413452641#181128#181134regiongenotypes
805131723850317375197#181378#181384regiongenotypes
805131754177017616813#11390#89268regiongenotypes
8041382346558361957#180817#180823regiongenotypes
8041394367589489053#180886#180890regiongenotypes
8031352706225332931#180629#11269regiongenotypes
8031364497876487848#180699#180702regiongenotypes
8031374105137455499#11292#180766regiongenotypes
8031379086547957327#180795#180798regiongenotypes
8031387684098828643#180845#11303regiongenotypes
803131011705910152493#39570#89150regiongenotypes
803131179046511834689#181033#11337regiongenotypes
803131193820311994854#181043#181046regiongenotypes
803131283712812897466#89200#39600regiongenotypes
803131312213013189273#11348#181118regiongenotypes
803131379853513837358#11356#181157regiongenotypes
803131512330815211017#181241#181244regiongenotypes
803131668746316742602#181341#181344regiongenotypes
803131675551716807766#181346#181349regiongenotypes
803131815146918171797#181431#181432regiongenotypes
8021352285165270622#180628#180629regiongenotypes
8021370988297146188#180740#180744regiongenotypes
8021385558778597098#39549#11299regiongenotypes
8021392367349276040#180870#180873regiongenotypes
8021392942409327957#180875#180878regiongenotypes
8021393389399391939#180879#180882regiongenotypes
8021394890539530387#180890#180893regiongenotypes
802131015715110184498#180930#39575regiongenotypes
802131044467010479954#180947#180949regiongenotypes
802131109767111132643#180990#180993regiongenotypes
802131212938712161770#181054#181057regiongenotypes
802131250949412539831#181076#181079regiongenotypes
802131289746612929609#39600#181105regiongenotypes
802131304285313083847#181111#181113regiongenotypes
802131310232213122130#181115#11348regiongenotypes
802131319167913242525#181119#181121regiongenotypes
802131325114313287200#39607#39609regiongenotypes
802131383735813891852#181157#181160regiongenotypes
802131389185213938384#181160#181163regiongenotypes
802131401533114059619#11360#181169regiongenotypes
802131415199414179958#11364#181176regiongenotypes
802131419124914226394#181177#181180regiongenotypes
802131456653114615683#181206#181209regiongenotypes
802131498804415086018#181232#181237regiongenotypes
802131509295615123308#181238#181241regiongenotypes
802131657343116632070#181333#181336regiongenotypes
802131665387916687463#181338#181341regiongenotypes
8011352018275228516#180627#180628regiongenotypes
8011363838436418765#180695#180697regiongenotypes
8011364187656449787#180697#180699regiongenotypes
8011372465997279145#180752#180754regiongenotypes
8011379573277991865#180798#180800regiongenotypes
8011381389038167754#180809#180811regiongenotypes
8011381971278233847#180813#180816regiongenotypes
8011383797978414539#180824#180825regiongenotypes
8011384314378458731#180827#180829regiongenotypes
8011384873318516231#180832#180834regiongenotypes
8011385162318555877#180834#39549regiongenotypes
8011395424349569071#11312#180896regiongenotypes
801131027012810312827#180938#180940regiongenotypes
801131031282710329416#180940#39577regiongenotypes
801131062321310644572#180960#180962regiongenotypes
801131192001411938203#181041#181043regiongenotypes
801131220415212242584#181059#181061regiongenotypes
801131253983112561842#181079#39595regiongenotypes
801131280456712837128#181097#89200regiongenotypes
801131298474613015954#181108#181110regiongenotypes
801131301595413029923#181110#39601regiongenotypes
801131308384713102322#181113#181115regiongenotypes
801131367870913731432#181147#181151regiongenotypes
801131373143213756985#181151#181152regiongenotypes
801131393838413961864#181163#11359regiongenotypes
801131397340414015331#181165#11360regiongenotypes
801131409931714135020#11362#181174regiongenotypes
801131434705714369108#181189#181191regiongenotypes
801131441120914446907#181195#181197regiongenotypes
801131449361014513030#181201#181203regiongenotypes
801131462862514662142#181210#181212regiongenotypes
801131483552014906091#181225#181227regiongenotypes
801131490609114929284#181227#181228regiongenotypes
801131492928414962441#181228#181230regiongenotypes
801131621223516232640#181305#11379regiongenotypes
801131663207016653879#181336#181338regiongenotypes
801131685837516893476#39633#11385regiongenotypes
801131693081316956506#181355#39635regiongenotypes
801131706924217098799#181365#181367regiongenotypes
801131804780118079579#181422#181425regiongenotypes
801131810494018126197#181427#181429regiongenotypes
801131812619718151469#181429#181431regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameaffecteds_350_320change name
analysis_nameaffecteds_350_320change name
max_block_length80
max_score880
user_loginahramd
lower_limit0
date2012-12-03 00:00:00
cases320-001,320-003,320-005,350-001,350-002,350-005,350-011,350-020,350-022,350-033,350-043
controlsnone


retrieve homozyosity scores