Homozygosity on chromosome 25 in affecteds_350_320 - affecteds_350_320

max homozygosity score: 880
 51 markers
32448623 bp chromosome 25 33005804 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
752253244862333005804#218966#218997regiongenotypes
narrow - use this when all patients are in the same family
752253244862332559989#218966#218973regiongenotypes
737253258353032611409#112014#19951regiongenotypes
732253280177532869594#218984#218988regiongenotypes
732253294974033005804#49792#218997regiongenotypes
730253270628732736153#218979#19953regiongenotypes
728253286959432899679#218988#218989regiongenotypes
727253267655932706287#49788#218979regiongenotypes
727253277652832801775#218983#218984regiongenotypes
727253292654432949740#218992#49792regiongenotypes
726253273615332756863#19953#218982regiongenotypes
726253275686332776528#218982#218983regiongenotypes
725253261140932643632#19951#218977regiongenotypes
723253262635032649915#218976#112021regiongenotypes
723253264991532660792#112021#218978regiongenotypes
722253288776532910281#49790#218990regiongenotypes
721253289967932926544#218989#218992regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
  
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameaffecteds_350_320change name
analysis_nameaffecteds_350_320change name
max_block_length80
max_score880
user_loginahramd
lower_limit0
date2012-12-03 00:00:00
cases320-001,320-003,320-005,350-001,350-002,350-005,350-011,350-020,350-022,350-033,350-043
controlsnone


retrieve homozyosity scores