Homozygosity on chromosome 32 in affecteds_350_320 - affecteds_350_320

max homozygosity score: 880
277 markers
36791310 bp chromosome 32 41655244 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
853323679131041655244#23621#235220regiongenotypes
narrow - use this when all patients are in the same family
853323843432539390236#235050#23646regiongenotypes
814323784968938089875#235017#235029regiongenotypes
813323679131036961351#23621#234960regiongenotypes
813323716137937335080#234974#234984regiongenotypes
804323763702237686712#235004#235008regiongenotypes
804323820910538274116#235036#235041regiongenotypes
803323775121537795702#235012#23629regiongenotypes
803323830659438382345#235042#235045regiongenotypes
802323752608537570290#54528#234999regiongenotypes
802323757029037598601#234999#23626regiongenotypes
802323768671237751215#235008#235012regiongenotypes
802323816332738209105#235032#235036regiongenotypes
801323701445137035457#234964#234966regiongenotypes
801323710402737161379#234970#234974regiongenotypes
801323735046137384321#234985#234987regiongenotypes
801323738432137399027#234987#234989regiongenotypes
801323739902737422757#234989#54527regiongenotypes
801323759860137637022#23626#235004regiongenotypes
801323779570237849689#23629#235017regiongenotypes
801323808987538163327#235029#235032regiongenotypes
801323838234538408677#235045#235047regiongenotypes
786323975585140431000#235124#235155regiongenotypes
750323942223339744698#235106#235123regiongenotypes
730324050469440606910#235162#235169regiongenotypes
730324088368140959633#23657#235183regiongenotypes
730324135436041655244#235210#235220regiongenotypes
724324105091441108474#123174#235192regiongenotypes
724324113846941194688#235195#235199regiongenotypes
724324121691041268047#235200#235204regiongenotypes
722323939023639422233#23646#235106regiongenotypes
722324044841840479026#235157#235159regiongenotypes
722324060691040634384#235169#54546regiongenotypes
722324067385140696367#235173#235175regiongenotypes
722324069636740712955#235175#123168regiongenotypes
722324084548640883681#235180#23657regiongenotypes
722324127777741312004#235205#235207regiongenotypes
722324131200441334110#235207#235209regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameaffecteds_350_320change name
analysis_nameaffecteds_350_320change name
max_block_length80
max_score880
user_loginahramd
lower_limit0
date2012-12-03 00:00:00
cases320-001,320-003,320-005,350-001,350-002,350-005,350-011,350-020,350-022,350-033,350-043
controlsnone


retrieve homozyosity scores