Homozygosity on chromosome 3 in affecteds_350_320 - affecteds_350_320_copy

max homozygosity score: 880
3 markers
62190638 bp chromosome 3 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
80136219063862211510#29286#29287regiongenotypes
narrow - use this when all patients are in the same family
80136219063862211510#29286#29287regiongenotypes
80036219980662211510#143269#29287regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameaffecteds_350_320change name
analysis_nameaffecteds_350_320_copychange name
max_block_length80
max_score880
user_loginahramd
lower_limit0
date2012-12-05 00:00:00
cases320-001,320-003,320-005,350-001,350-002,350-005,350-011,350-020,350-022,350-033,350-043
controlsnone


retrieve homozyosity scores