Homozygosity on chromosome 17 in canine_100_ped_homo_ys - sharp

max homozygosity score: 320
22 markers
33594537 bp chromosome 17 33892477 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
260173359453733892477#195419#195431regiongenotypes
narrow - use this when all patients are in the same family
260173359453733892477#195419#195431regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_namecanine_100_ped_homo_yschange name
analysis_namesharpchange name
max_block_length80
max_score320
user_loginahramd1
lower_limit0
date2014-05-20 00:00:00
cases100-001,100-002,100-013,100-017
controlsnone


retrieve homozyosity scores