Homozygosity on chromosome 30 in canine_100_ped_homo_ys - sharp

max homozygosity score: 320
11 markers
5425418 bp chromosome 30 5544192 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
2683054254185544192#228898#228904regiongenotypes
narrow - use this when all patients are in the same family
2683054254185544192#228898#228904regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
 
complete genes within these only exons flanked by bases on each side.

analysis settings
project_namecanine_100_ped_homo_yschange name
analysis_namesharpchange name
max_block_length80
max_score320
user_loginahramd1
lower_limit0
date2014-05-20 00:00:00
cases100-001,100-002,100-013,100-017
controlsnone


retrieve homozyosity scores