| Click on a chromosome to zoom in. | help tutorial |
| score | chr | from (bp) | to (bp) | from SNP | to SNP | build 37 | |
| broad - use this when you expect some genetic heterogeneity | |||||||
| 400 | 5 | 56618321 | 57953405 | #82081 | #87600 | region | genotypes |
| 400 | 28 | 26994978 | 33096711 | #89270 | #101141 | region | genotypes |
| 341 | 16 | 43174027 | 44529045 | #818051 | #796798 | region | genotypes |
| 333 | 5 | 55407180 | 56410718 | #817106 | #808725 | region | genotypes |
| 333 | 11 | 52491236 | 54730416 | #813320 | #806571 | region | genotypes |
| 331 | 5 | 51569462 | 52249541 | #819299 | #95981 | region | genotypes |
| 331 | 5 | 54333458 | 55193544 | #81609 | #793162 | region | genotypes |
| 326 | 11 | 55809281 | 56800152 | #807879 | #807681 | region | genotypes |
| 325 | 11 | 54765154 | 55062461 | #803687 | #814512 | region | genotypes |
| 325 | 11 | 57912600 | 58442169 | #799321 | #79415 | region | genotypes |
| 324 | 11 | 52155944 | 52491236 | #79410 | #813320 | region | genotypes |
| 324 | 11 | 56858167 | 57029034 | #810966 | #815534 | region | genotypes |
| 324 | 11 | 58754953 | 58962936 | #798587 | #804770 | region | genotypes |
| 324 | 28 | 24900950 | 25020359 | #797778 | #83931 | region | genotypes |
| 323 | 11 | 57184891 | 57366796 | #818524 | #87822 | region | genotypes |
| 323 | 11 | 58524865 | 58684365 | #811200 | #798588 | region | genotypes |
| 323 | 16 | 45376614 | 46069918 | #97207 | #100972 | region | genotypes |
| 323 | 28 | 25609489 | 25938159 | #97119 | #86026 | region | genotypes |
| 323 | 28 | 26035238 | 26211511 | #99158 | #88871 | region | genotypes |
| 323 | 28 | 26211511 | 26362076 | #88871 | #83259 | region | genotypes |
| 323 | 28 | 26756338 | 26885074 | #94578 | #85933 | region | genotypes |
| 322 | 5 | 51064864 | 51213449 | #92847 | #807804 | region | genotypes |
| 322 | 5 | 52771740 | 53576870 | #99543 | #793705 | region | genotypes |
| 322 | 5 | 53576870 | 53704130 | #793705 | #793040 | region | genotypes |
| 322 | 5 | 53734114 | 54120342 | #818769 | #809653 | region | genotypes |
| 322 | 5 | 54209940 | 54333458 | #812682 | #81609 | region | genotypes |
| 322 | 5 | 55263796 | 55407180 | #791634 | #817106 | region | genotypes |
| 322 | 11 | 51519270 | 51741896 | #82796 | #84557 | region | genotypes |
| 322 | 11 | 57029034 | 57131335 | #815534 | #87949 | region | genotypes |
| 322 | 11 | 58684365 | 58754953 | #798588 | #798587 | region | genotypes |
| 322 | 11 | 58962936 | 59110486 | #804770 | #100023 | region | genotypes |
| 322 | 16 | 44561165 | 45017787 | #88573 | #796799 | region | genotypes |
| 322 | 28 | 26530892 | 26667266 | #93526 | #815773 | region | genotypes |
| 321 | 5 | 51276764 | 51569462 | #84204 | #819299 | region | genotypes |
| 321 | 5 | 52300318 | 52771740 | #806441 | #99543 | region | genotypes |
| 321 | 5 | 54120342 | 54209940 | #809653 | #812682 | region | genotypes |
| 321 | 5 | 56410718 | 56585423 | #808725 | #95710 | region | genotypes |
| 321 | 11 | 51784891 | 52045971 | #805482 | #805148 | region | genotypes |
| 321 | 11 | 55170733 | 55264686 | #82556 | #807698 | region | genotypes |
| 321 | 11 | 55651215 | 55745998 | #793581 | #806483 | region | genotypes |
| 321 | 11 | 57366796 | 57502540 | #87822 | #813521 | region | genotypes |
| 321 | 11 | 57522675 | 57639084 | #811197 | #818348 | region | genotypes |
| 321 | 11 | 58442169 | 58501865 | #79415 | #80422 | region | genotypes |
| 321 | 28 | 25020359 | 25060861 | #83931 | #791991 | region | genotypes |
| 321 | 28 | 25352987 | 25609489 | #808699 | #97119 | region | genotypes |
| 321 | 28 | 26689199 | 26735196 | #99373 | #100733 | region | genotypes |
| narrow - use this when all patients are in the same family | |||||||
| 400 | 5 | 56618321 | 57953405 | #82081 | #87600 | region | genotypes |
| 400 | 28 | 26994978 | 33096711 | #89270 | #101141 | region | genotypes |
| 341 | 16 | 43174027 | 44529045 | #818051 | #796798 | region | genotypes |
| 333 | 5 | 55407180 | 56410718 | #817106 | #808725 | region | genotypes |
| 333 | 11 | 52491236 | 54730416 | #813320 | #806571 | region | genotypes |
| 331 | 5 | 51569462 | 52249541 | #819299 | #95981 | region | genotypes |
| 331 | 5 | 54333458 | 55193544 | #81609 | #793162 | region | genotypes |
| 326 | 11 | 55809281 | 56800152 | #807879 | #807681 | region | genotypes |
| 325 | 11 | 54765154 | 55062461 | #803687 | #814512 | region | genotypes |
| 325 | 11 | 57912600 | 58442169 | #799321 | #79415 | region | genotypes |
| 324 | 11 | 52155944 | 52491236 | #79410 | #813320 | region | genotypes |
| 324 | 11 | 56858167 | 57029034 | #810966 | #815534 | region | genotypes |
| 324 | 11 | 58754953 | 58962936 | #798587 | #804770 | region | genotypes |
| 324 | 28 | 24900950 | 25020359 | #797778 | #83931 | region | genotypes |
| 323 | 11 | 57184891 | 57366796 | #818524 | #87822 | region | genotypes |
| 323 | 11 | 58524865 | 58684365 | #811200 | #798588 | region | genotypes |
| 323 | 16 | 45376614 | 46069918 | #97207 | #100972 | region | genotypes |
| 323 | 28 | 25609489 | 25938159 | #97119 | #86026 | region | genotypes |
| 323 | 28 | 26035238 | 26211511 | #99158 | #88871 | region | genotypes |
| 323 | 28 | 26211511 | 26362076 | #88871 | #83259 | region | genotypes |
| 323 | 28 | 26756338 | 26885074 | #94578 | #85933 | region | genotypes |
| 322 | 5 | 51064864 | 51213449 | #92847 | #807804 | region | genotypes |
| 322 | 5 | 52771740 | 53576870 | #99543 | #793705 | region | genotypes |
| 322 | 5 | 53576870 | 53704130 | #793705 | #793040 | region | genotypes |
| 322 | 5 | 53734114 | 54120342 | #818769 | #809653 | region | genotypes |
| 322 | 5 | 54209940 | 54333458 | #812682 | #81609 | region | genotypes |
| 322 | 5 | 55263796 | 55407180 | #791634 | #817106 | region | genotypes |
| 322 | 11 | 51519270 | 51741896 | #82796 | #84557 | region | genotypes |
| 322 | 11 | 57029034 | 57131335 | #815534 | #87949 | region | genotypes |
| 322 | 11 | 58684365 | 58754953 | #798588 | #798587 | region | genotypes |
| 322 | 11 | 58962936 | 59110486 | #804770 | #100023 | region | genotypes |
| 322 | 16 | 44561165 | 45017787 | #88573 | #796799 | region | genotypes |
| 322 | 28 | 26530892 | 26667266 | #93526 | #815773 | region | genotypes |
| 321 | 5 | 51276764 | 51569462 | #84204 | #819299 | region | genotypes |
| 321 | 5 | 52300318 | 52771740 | #806441 | #99543 | region | genotypes |
| 321 | 5 | 54120342 | 54209940 | #809653 | #812682 | region | genotypes |
| 321 | 5 | 56410718 | 56585423 | #808725 | #95710 | region | genotypes |
| 321 | 11 | 51784891 | 52045971 | #805482 | #805148 | region | genotypes |
| 321 | 11 | 55170733 | 55264686 | #82556 | #807698 | region | genotypes |
| 321 | 11 | 55651215 | 55745998 | #793581 | #806483 | region | genotypes |
| 321 | 11 | 57366796 | 57502540 | #87822 | #813521 | region | genotypes |
| 321 | 11 | 57522675 | 57639084 | #811197 | #818348 | region | genotypes |
| 321 | 11 | 58442169 | 58501865 | #79415 | #80422 | region | genotypes |
| 321 | 28 | 25020359 | 25060861 | #83931 | #791991 | region | genotypes |
| 321 | 28 | 25352987 | 25609489 | #808699 | #97119 | region | genotypes |
| 321 | 28 | 26689199 | 26735196 | #99373 | #100733 | region | genotypes |
| analysis settings | ||
| project_name | IllBovGTFull | change name |
| analysis_name | SNP50 CDA | change name |
| analysis_description | Case control | |
| max_block_length | 80 | |
| max_score | 400 | |
| user_login | mominahmed72 | |
| homogeneity_required | homogeneity required | |
| lower_limit | 0 | |
| date | 2018-03-28 00:00:00 | |
| exclusion_length | 250 | |
| cases | Z1225.GT,Z1327.GT,Z1370.GT,Z1569.GT,Z1570.GT | |
| controls | M13-07473/0002.GT,M13-07473/0003.GT,M13-07629/0001.GT,M13-11288/0001.GT,M13-11288/0002.GT,Z1111.GT,Z1121.GT,Z1122.GT,Z1123.GT,Z1125.GT,Z1141.GT,Z1142.GT,Z1266.GT,Z1356.GT,Z1357.GT,Z1366.GT,Z1371.GT,Z1372.GT,Z1448.GT,Z1449.GT,Z1451.GT,Z1452.GT,Z1453.GT,Z1454.GT,Z1455.GT,Z1456.GT,Z1457.GT,Z1555.GT,Z1556.GT,Z1557.GT,Z1558.GT,Z1559.GT,Z1560.GT,Z1561.GT,Z1562.GT,Z1563.GT,Z1564.GT,Z1565.GT,Z1566.GT,Z1567.GT,Z1568.GT,Z1574.GT,Z1577.GT | |