Homozygosity on chromosome 12 in Example cutis laxa - cutis laxa

max homozygosity score: 160
 23 markers
117367463 bp chromosome 12 126641435 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 36
broad - use this when you expect some genetic heterogeneity
16012117367463125487124rs1018147rs722704regiongenotypes
13512126238381126641435rs950591rs2013160regiongenotypes
narrow - use this when all patients are in the same family
16012117367463125487124rs1018147rs722704regiongenotypes
13512126238381126641435rs950591rs2013160regiongenotypes

change threshold

call GeneDistiller build 36 with all regions at once

create files for Alohomora
flanking region [bp]

create a BED file build 36
complete homozygous regions shown here
  
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameExample cutis laxachange name
analysis_namecutis laxachange name
analysis_descriptionPubMed
max_block_length40
max_score160
allele_frequenciescontrols
user_loginexamples
cases8106,8107,8108,8109
controls405-5491,407-5803


retrieve homozyosity scores
new & highly experimental: show this for build 36