HomozygosityMapper
Homo sapiens
(Re)analyse your genotypes
project
Tutorial
Tutorial_VCF
Example CS
Example cutis laxa
re-analyse
new
analysis name
analysis description
cases
controls
homogeneity
require genetic homogeneity
Checking this box will
only
detect regions in which
all
affected individuals are homozygous. Use this for searches within single families.
exclude homozygous stretches in controls >=
(recommended: )
Regions with the 'disease haplotype' in controls will be excluded when they are longer than this value. Use -1 if you don't want to use controls for region exclusion.
allele frequencies
none
from controls
HapMap: CEPH (European origin)
HapMap: Yoruba)
HapMap: HapMap: Han Chinese
HapMap: HapMap: Japanese
not possible for VCF-based genotypes
limit block length
leave empty to use standard settings for chip
only count blocks longer than
lower limit; default is 0 (i.e. every homozygous block is counted)
reset
help
tutorial