Homozygosity on chromosome 3 in V2FUll - v2

max homozygosity score: 240
 147 markers
56669877 bp chromosome 3 63870930 bp
You can define a region in which you like to zoom in or inspect the genotypes by clicking on the left and right limits of it in the plot. help                tutorial
scorechrfrom (bp)to (bp)from SNPto SNPbuild 37
broad - use this when you expect some genetic heterogeneity
24035666987763870930#802460#803956regiongenotypes
narrow - use this when all patients are in the same family
24035666987763870930#802460#803956regiongenotypes

change threshold

create files for Alohomora
flanking region [bp]

create a BED file build 37
complete homozygous regions shown here
  
complete genes within these only exons flanked by bases on each side.

analysis settings
project_nameV2FUllchange name
analysis_namev2change name
max_block_length80
max_score240
user_loginmominahmed72
homogeneity_requiredhomogeneity required
lower_limit0
date2018-03-28 00:00:00
exclusion_length250
casesZ1225.GT,Z1327.GT,Z1370.GT
controlsZ1111.GT,Z1121.GT,Z1123.GT,Z1125.GT


retrieve homozyosity scores